BLASTN 2.2.3 [May-13-2002]
Reference: Altschul, Stephen F., Thomas L. Madden, Alejandro A. Schaffer,
Jinghui Zhang, Zheng Zhang, Webb Miller, and David J. Lipman (1997),
"Gapped BLAST and PSI-BLAST: a new generation of protein database search
programs", Nucleic Acids Res. 25:3389-3402.
Query= BA0AB012F01LP1|AL426389
(772 letters)
Database: Klactis 3X assemblage 11/02
1807 sequences; 10,358,551 total letters
Searching....done
Score E
Sequences producing significant alignments: (bits) Value
3x_Contig1774 1521 0.0
>3x_Contig1774
Length = 27771
Score = 1521 bits (766), Expect = 0.0
Identities = 770/772 (99%)
Strand = Plus / Minus
Query: 1 gatctctttagtttctcgtagaacttkcgaaccgaaactcctatattactgttaatttcg 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 8187 gatctctttagtttctcgtagaacttacgaaccgaaactcctatattactgttaatttcg 8128
Query: 61 ttttcaacacgatatacaaccttccgctgttttcaacacaggaccaaaatatattattct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8127 ttttcaacacgatatacaaccttccgctgttttcaacacaggaccaaaatatattattct 8068
Query: 121 tatcagtgacaagccctatgtctatatcaaattaaagctttaatagtcaatgtctgttcc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8067 tatcagtgacaagccctatgtctatatcaaattaaagctttaatagtcaatgtctgttcc 8008
Query: 181 tgttcctattcctattcctattcctatttctatttcaatttcaaatttcgttttcgtctt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 8007 tgttcctattcctattcctattcctatttctatttcaatttcaaatttcgttttcgtctt 7948
Query: 241 ttttcatttttcctttgaaagttccagttccagttccagcttcagttcctgtcataaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7947 ttttcatttttcctttgaaagttccagttccagttccagcttcagttcctgtcataaaaa 7888
Query: 301 cactcatagtaagcagggtccttaactatgtgtggraatgagaccccttttttataggag 360
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 7887 cactcatagtaagcagggtccttaactatgtgtggaaatgagaccccttttttataggag 7828
Query: 361 agtggccgggtaatacaaataaaatacaaataaaatacacacaggtcacgtgaacacccg 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7827 agtggccgggtaatacaaataaaatacaaataaaatacacacaggtcacgtgaacacccg 7768
Query: 421 attacaaaagtttatcaatcaatcgatcattggaaccgatccagcctccttcgttttaca 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7767 attacaaaagtttatcaatcaatcgatcattggaaccgatccagcctccttcgttttaca 7708
Query: 481 cgtgactagaaaaagataatcaaaacacatatcgctacttacgttagagaatatatcatc 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7707 cgtgactagaaaaagataatcaaaacacatatcgctacttacgttagagaatatatcatc 7648
Query: 541 agatcacatgatacgaactggaatatttcttttccatcaagtgcatctgctaaattttca 600
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7647 agatcacatgatacgaactggaatatttcttttccatcaagtgcatctgctaaattttca 7588
Query: 601 aagagatataatcagtttttcaacatagcattaactaactgatcggtatagctcatcgct 660
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7587 aagagatataatcagtttttcaacatagcattaactaactgatcggtatagctcatcgct 7528
Query: 661 tgaaagaaagtgtcttgttatccatatatctagttccttttcacttccaaccaaaagcat 720
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7527 tgaaagaaagtgtcttgttatccatatatctagttccttttcacttccaaccaaaagcat 7468
Query: 721 ctatcacactctacccactacccactatgcatttgatgtacactttggatgc 772
||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 7467 ctatcacactctacccactacccactatgcatttgatgtacactttggatgc 7416
Database: Klactis 3X assemblage 11/02
Posted date: Nov 27, 2002 12:23 PM
Number of letters in database: 10,358,551
Number of sequences in database: 1807
Lambda K H
1.38 0.711 1.31
Gapped
Lambda K H
1.38 0.711 1.31
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 5, Extension: 2
Number of Hits to DB: 7330
Number of Sequences: 1807
Number of extensions: 7330
Number of successful extensions: 77
Number of sequences better than 1.0e-20: 1
length of query: 772
length of database: 10,358,551
effective HSP length: 16
effective length of query: 756
effective length of database: 10,329,639
effective search space: 7809207084
effective search space used: 7809207084
T: 0
A: 40
X1: 6 (11.9 bits)
X2: 15 (29.8 bits)
S1: 12 (24.3 bits)
S2: 50 (99.8 bits)